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Inside view of a blueberry cream cheese muffin showing creamy filling and juicy berries

Blueberry Cream Cheese Muffins Recipe Card

Bakery-Style Muffins with Juicy Blueberries and a Creamy Swirl
Moist, fluffy, and bursting with blueberries, these cream cheese–filled muffins are the perfect balance of fruity sweetness and creamy richness. Ideal for breakfast, brunch, or a midday treat!
Prep Time 15 minutes
Cook Time 22 minutes
Total Time 37 minutes
Course Breakfast
Cuisine American
Servings 12 standard muffins
Calories 250 kcal

Ingredients
  

Muffin Batter:

  • 2 cups all-purpose flour
  • 1 tsp baking powder
  • ½ tsp baking soda
  • ½ tsp salt
  • ½ cup unsalted butter, melted
  • ¾ cup granulated sugar
  • 2 large eggs, room temp
  • 1 tsp vanilla extract
  • ½ cup Greek yogurt or sour cream
  • ½ cup milk
  • 1 ¼ cups fresh or frozen blueberries (tossed in 1 tsp flour)

Cream Cheese Filling:

  • 6 oz cream cheese, softened
  • 3 tbsp powdered sugar
  • ½ tsp vanilla extract

Instructions
 

  • Preheat oven to 375°F (190°C). Line a 12-cup muffin pan with paper liners.
  • Make the filling: Beat cream cheese, powdered sugar, and vanilla until smooth. Set aside.
  • Mix dry ingredients: In a bowl, whisk flour, baking powder, baking soda, and salt.
  • Mix wet ingredients: In another bowl, whisk melted butter, sugar, eggs, vanilla, yogurt, and milk until smooth.
  • Combine: Slowly add dry to wet, mixing just until combined. Gently fold in the blueberries.
  • Fill muffin cups: Spoon batter to fill each liner halfway. Add 1–2 tsp cream cheese mixture in the center. Top with more batter to fill ¾ full. Swirl tops with a toothpick if desired.
  • Bake: For 20–24 minutes, or until tops are golden and a toothpick (not hitting cream cheese) comes out clean.
  • Cool: Let muffins sit in pan 5 mins, then transfer to a wire rack to cool completely.

Notes

  • Use room temp cream cheese for smooth filling 
  • Don't overmix the batter—stir just until combined
  • For frozen berries: use directly from the freezer and add extra 1–2 minutes to bake time
  • Optional: top muffins with coarse sugar or crumb topping before baking
Keyword bakery-style muffins, blueberry cream cheese muffins, blueberry muffins with filling,, cream cheese swirl muffins